AI & data

Fri 2 Oct35 papers

medRxivHumansPreprint

Proteomic disease prediction models generalize across biobanks

In models trained on 53,026 UK Biobank participants, 13 of 15 incident disease models maintained performance across FinnGen and All of Us cohorts.In models trained on 53,026 UK Biobank participants, 13 of 15 incident disease models maintained performance across FinnGen and All of Us cohorts. In a preprint analyzing human data across three major cohorts, researchers tested how well blood proteomic disease risk models transfer across…

Skeletal RadiologyHumans

Spinal bone marrow fat increases with age across all regions

In 81,318 UK Biobank adults, vertebral bone marrow fat rose 2.95% to 3.83% per decade across spinal regions, with higher levels in females.In 81,318 UK Biobank adults, vertebral bone marrow fat rose 2.95% to 3.83% per decade across spinal regions, with higher levels in females. In a retrospective study of 81,318 UK Biobank participants, researchers mapped bone marrow adipose tissue across the human spine.

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Advanced ScienceIn silico

Facial foundation model estimates clinical biomarkers

Pretrained on 10 million images, the model assessed 62 biomarkers across eight physiological systems, reaching a median Pearson's r of 0.172 across…Pretrained on 10 million images, the model assessed 62 biomarkers across eight physiological systems, reaching a median Pearson's r of 0.172 across four cohorts. In human datasets, researchers developed MedicalFaceFound, a facial foundation model trained on over 10 million images to…

JACC AdvancesIn silico

Deep learning matches experts in scoring aortic valve calcium

Algorithm scores correlated strongly with expert assessments at r = 0.99, identifying moderate-to-severe aortic stenosis with 0.92 sensitivity and…Algorithm scores correlated strongly with expert assessments at r = 0.99, identifying moderate-to-severe aortic stenosis with 0.92 sensitivity and 0.98 specificity. In nongated chest CT scans from patients across 33 sites in the United States and Brazil, an automated deep learning…

Graphical abstract
Journal of the American College of SurgeonsHumans

CT biomarkers improve postoperative mortality prediction

Adding automated CT biomarkers to an ICD-based frailty score raised one-year mortality prediction AUROC from 0.75 to 0.79 in 7,638 surgery patients.Adding automated CT biomarkers to an ICD-based frailty score raised one-year mortality prediction AUROC from 0.75 to 0.79 in 7,638 surgery patients. In a retrospective cohort of 7,672 patients undergoing non-emergent surgery at a tertiary academic center, researchers evaluated whether…

Proceedings of Machine Learning ResearchIn silico

Reinforcement learning alerts to Alzheimer's 20.9 months early

A reinforcement learning model alerted to Alzheimer's disease 20.9 months before diagnosis and autism 8.7 months before diagnosis, both at 90%…A reinforcement learning model alerted to Alzheimer's disease 20.9 months before diagnosis and autism 8.7 months before diagnosis, both at 90% specificity. In clinical electronic health record cohorts, researchers developed a model-free reinforcement learning framework to optimize the…

Cyborg and Bionic SystemsHumans

Language model multimorbidity score predicts mortality in adults

Across eight external cohorts, the score yielded C-indices of 0.67 to 0.86, outperforming recalibrated conventional comorbidity indices by absolute…Across eight external cohorts, the score yielded C-indices of 0.67 to 0.86, outperforming recalibrated conventional comorbidity indices by absolute gains of 0.12 to 0.21. In 770,439 adults from nine international longitudinal cohorts, researchers evaluated a large-language-model-based…

Overview of the LLM-MMS: global validation, robustness assessment, and generation framework.
Frontiers in NeurologyHumans

Osteocalcin links brain volume to cognition in osteoporosis

In people with osteoporosis, higher undercarboxylated osteocalcin correlated with greater medial prefrontal cortex volume, which predicted one-year…In people with osteoporosis, higher undercarboxylated osteocalcin correlated with greater medial prefrontal cortex volume, which predicted one-year cognitive decline with an AUC of 0.84.

Clinical assessment of osteoporosis (OP) patients and healthy participants (HC).
Research SquareIn silicoPreprint

Simple anatomical features match complex AI models on brain MRIs

Across about 80,000 human participants, simple anatomical measurements performed as well as complex AI models while improved pretraining boosted…Across about 80,000 human participants, simple anatomical measurements performed as well as complex AI models while improved pretraining boosted biological age estimation. In a preprint analyzing structural brain MRI scans from approximately 80,000 human participants across 18 datasets…

medRxivIn silicoPreprint

Distilled language models improve multimorbidity scoring

Compact models trained on synthetic UK Biobank cohorts predicted patient survival with concordance indices reaching 0.91 without exposing real…Compact models trained on synthetic UK Biobank cohorts predicted patient survival with concordance indices reaching 0.91 without exposing real clinical data. In health records from the UK Biobank, researchers developed a privacy-preserving computational framework to evaluate multimorbidity…

medRxivHumansPreprint

Brain MRI predicts conversion to mild cognitive impairment

Adding brain MRI to baseline traits predicted conversion from subjective decline to mild impairment with an AUC of 0.923 at five years.Adding brain MRI to baseline traits predicted conversion from subjective decline to mild impairment with an AUC of 0.923 at five years. In an observational study of 1,352 human participants with subjective cognitive decline, researchers evaluated machine learning models to forecast…

medRxivIn silicoPreprint

Automated tool counts teeth from routine brain MRI

The model counted teeth with a mean absolute error of 1.96 and matched manual associations with cognitive scores in a 233-person cohort.The model counted teeth with a mean absolute error of 1.96 and matched manual associations with cognitive scores in a 233-person cohort. In human brain MRI scans from the OASIS-3 study, researchers developed an automated pipeline to extract dental information from routine neuroimaging.

bioRxivAnimalsPreprint

Early life stress accelerates epigenetic aging in zebra finches

Corticosterone treatment shifts DNA methylation profiles in young chicks toward those of older birds and reshapes longevity pathways.Corticosterone treatment shifts DNA methylation profiles in young chicks toward those of older birds and reshapes longevity pathways. In zebra finch chicks (Taeniopygia guttata), experimental early-life stress accelerates epigenetic aging, according to a new preprint.

Fledgling and adult zebra finches beside nucleated red blood cells, beaded chromatin strands, and a steroid molecule.
bioRxivModel organismsPreprint

Neural stem cell exhaustion disrupts central nervous system renewal in aging colonial chordates

Researchers identified a conserved neural progenitor pool that drives weekly brain regeneration in Botryllus schlosseri but collapses during aging.Researchers identified a conserved neural progenitor pool that drives weekly brain regeneration in Botryllus schlosseri but collapses during aging. In the colonial chordate Botryllus schlosseri, the entire central nervous system resorbs and regenerates de novo each week.

Flower-like colonial chordates beneath branching neurons, surrounded by dense stem cells on the left and sparse, exhausted cells on the right.
medRxivHumansPreprint

Auditory nerve myelin degeneration defines a subtype of age-related hearing loss

Researchers linked poor auditory nerve synchrony and myelin degradation to amplified communication difficulties in older humans, beyond standard…Researchers linked poor auditory nerve synchrony and myelin degradation to amplified communication difficulties in older humans, beyond standard hearing thresholds. In a human study detailed in a preprint, researchers investigated how auditory nerve changes affect hearing in older adults.

Aging modifies the association between auditory nerve response amplitude and neural synchrony.
Genome MedicineHumans

Blood cell composition explains substantial variation in DNA methylation age

Cell counts explain less variation in age acceleration and only modestly affect its links to mortality and 176 incident health outcomes.Cell counts explain less variation in age acceleration and only modestly affect its links to mortality and 176 incident health outcomes. In a human study analyzing 4,058 samples, researchers evaluated how blood cell composition influences DNA methylation age and age acceleration across six…

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bioRxivCellsPreprint

Directly converted human neuronal spheroids preserve donor age and model Alzheimer disease

The three-dimensional cell platform maintains biological aging markers while spontaneously developing hallmark pathologies of sporadic Alzheimer…The three-dimensional cell platform maintains biological aging markers while spontaneously developing hallmark pathologies of sporadic Alzheimer disease. In a new preprint, researchers developed directly induced neuronal spheroids using primary fibroblasts from young, unimpaired aged, and…