NAR Genomics and Bioinformatics

DNA-based clock estimates age in East Asian populations

Estimates based on chemical marks at 38 DNA sites differed from participants’ actual ages by 6.22 years on average in the test group.

Paper by Kuan Chen Lu, Po-Hsiu Kuo, Amrita Sengupta Chattopadhyay, Tzu-Pin Lu · National Taiwan University
Computational study of 1,091 people of East Asian ancestryBiomarkers

Limit: Testing split pooled datasets instead of using a separately recruited validation cohort

Edited by Boris Djordjevic · AgingResearch.News

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In a computational modeling study, researchers analyzed whole-blood DNA data from 3,637 people of East Asian ancestry. They used 2,546 people aged 6.40–84.00 years to build the model and 1,091 aged 1.34–85.65 years to test it.

The model, called the EAS Clock, used DNA methylation, chemical marks on DNA, at 38 sites to estimate chronological age—how long someone has lived. Estimates tracked actual ages in both groups. The mean absolute error, the average size of a prediction’s error regardless of direction, was 7.48 years in training and 6.22 years in testing. Overestimates and underestimates largely balanced out in both groups.

Why it matters

Age-related disease highlights the need for molecular tools to assess aging. Such tools need evaluation across ancestries because clocks developed mainly in non-East Asian populations may be less well calibrated elsewhere.

Caveats

Testing used a random split of pooled datasets, not a separately recruited validation cohort. Predicting chronological age does not establish that the clock measures biological aging or predicts disease risk.

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