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A UHRF1 feed-forward mechanism sustains DNA methylation at CpG-sparse genomic regions

Binding of mono-ubiquitinated histone H3 by UHRF1 drives multi-mono-ubiquitination to prevent methylation loss in regions typically degraded during cancer and aging.

bioRxiv · Hrit JA et al. · Paper published 26 Sep 2026

Paper

In mammalian cells, researchers investigated how the epigenetic cofactor UHRF1 promotes multi-mono-ubiquitination on histone H3 tails to recruit the maintenance methyltransferase DNMT1. The preprint reports that UHRF1 directly binds its own mono-ubiquitinated H3 products through an uncharacterized LGDDSL loop within Tudor 2 of its tandem Tudor domain. This binding event promotes subsequent rounds of ubiquitin deposition in a feed-forward read-write loop. When the authors disrupted this ubiquitin-reading activity, cells showed impaired H3 multi-mono-ubiquitination. Consequently, this disruption accelerated the loss of DNA methylation in late-replicating, CpG-sparse genomic regions, mimicking the defects seen when UHRF1 ubiquitin ligase activity is lost.

Why it matters

DNA methylation loss in CpG-sparse, late-replicating domains is a recognized feature of both aging cells and cancer. Clarifying how UHRF1 protects these vulnerable regions reveals a molecular mechanism necessary for preserving mammalian epigenetic maintenance.

Caveats

The findings are based on cell models and have not yet undergone peer review, as the study is a preprint.

Written from the paper’s abstract, and every claim checked against it before publishing. Read the paper for the full methods and data.

The paper

A feed-forward UHRF1 read-write mechanism supports H3 multi- mono-ubiquitination and DNA methylation maintenance at CpG-sparse regions

Hrit JA, Tiedemann RL, Sartori VJ et al.

bioRxiv · 26 Sep 2026 · Preprint, not yet peer-reviewed

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Preprint